Miyakogusa Predicted Gene

Lj6g3v2006450.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IW90_MEDTR 1445 61.5 72.5 (tr|G7IW90) NB-LRR type disease resistance protein Rps1-k-2 OS=Medicago truncatula GN=MTR_3g020890 PE=4 SV=1
TAIR_pep AT3G14470.1 660 37.6 57.6 | Symbols: | NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054
Medicago Medtr3g020890.1 1445 61.5 72.5 | NB-ARC domain disease resistance protein | LC | chr3:6060991-6057172 | 20130731
Soybean Glyma03g04560.1 1383 58.6 72.3  
LJGI gnl|LJGI|DC593605 484 86.2 86.2 weakly similar to UniRef100_Q2YE88 Cluster: NBS-LRR type disease resistance protein Rps1-k-1; n=1; Glycine max|Rep: NBS-LRR type disease resistance protein Rps1-k-1 - Glycine max (Soybean), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2006450.1 length: 1237 aa.
IPR000767 Disease resistance protein
method AccNumber shortName E-value location
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 1e-18 187-202
260-274
357-371
871-887
IPR001611 Leucine-rich repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.32 591-612
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 4.7e-73 170-448
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 5.4e-35 144-394
no_ID  
Coil coil coiled-coil NA 41-62
Gene3D G3DSA:3.40.50.300 no description 6e-13 164-330
Gene3D G3DSA:3.80.10.10 no description 6.2e-23 560-666
713-942
943-1207
HMMPanther PTHR23155 LEUCINE-RICH 7.6e-184 15-867
HMMPanther PTHR23155:SF138OS03G0848700 PROTEIN 7.6e-184 15-867
Seg seg seg NA 165-184
1144-1157
superfamily SSF52058 L 1.3e-32 481-909
902-1225
Wolf-PSORT
Lj6g3v2006450.1	plas 5, nucl 2, extr 2, E.R. 2, chlo 1, cyto 1, mito 1, chlo_mito 1, cysk_nucl 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v2006450.1