Miyakogusa Predicted Gene

Lj6g3v2006160.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M1F5_SOYBN 679 71.3 78.0 (tr|K7M1F5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G05200.2 262 36.8 55.3 | Symbols: ATGLR3.4, GLR3.4, GLUR3 | glutamate receptor 3.4 | chr1:1505642-1509002 FORWARD LENGTH=959
Medicago Medtr2g015270.1 672 68.1 77.3 | glutamate receptor 3.4 | HC | chr2:4489733-4484918 | 20130731
Soybean Glyma13g30660.1 626 67.6 74.3  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2006160.1 length: 470 aa.
IPR001320 Ionotropic glutamate receptor
method AccNumber shortName E-value location
Molecular Function GO:0004970 ionotropic glutamate receptor activity    
Molecular Function GO:0005234 extracellular-glutamate-gated ion channel activity    
Cellular Component GO:0016020 membrane    
HMMPfam PF00060 Lig_chan 1.6e-31 125-377
HMMSmart SM00079 Eukaryotic 8.4e-15 7-345
IPR001638 Extracellular solute-binding protein, family 3
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0030288 outer membrane-bounded periplasmic space    
HMMPfam PF00497 SBP_bac_3 2.1e-21 34-343
no_ID  
Gene3D G3DSA:1.10.287.70 no description 1.8e-27 114-250
Gene3D G3DSA:3.40.190.10 no description 2e-30 301-343
HMMPanther PTHR18966 IONOTROPIC 4.8e-135 1-460
HMMPanther PTHR18966:SF6 GLUTAMATE 4.8e-135 1-460
Seg seg seg NA 200-212
superfamily SSF53850 Periplasmic 6.3e-41 34-346
Wolf-PSORT
Lj6g3v2006160.1	nucl 4, chlo 3, plas 3, cyto_nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v2006160.1