Miyakogusa Predicted Gene

Lj6g3v1995970.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M1W2_SOYBN 911 83.4 89.8 (tr|I1M1W2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G28690.1 650 60.5 76.9 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:10080042-10081604 REVERSE LENGTH=520
Medicago Medtr2g015530.1 870 82.0 89.9 | pentatricopeptide (PPR) repeat protein | HC | chr2:4610013-4612058 | 20130731
Soybean Glyma13g30520.1 911 83.4 89.8  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1995970.1 length: 525 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.035 100-128
178-207
210-235
HMMPfam PF13041 PPR_2 1.6e-11 338-387
HMMPfam PF13812 PPR_3 0.31 412-438
HMMTigr TIGR00756 PPR: 0.0011 100-132
178-207
314-340
341-375
377-410
ProfileScan PS51375 PPR 7.125 97-131
175-209
237-272
339-374
308-338
273-303
375-405
411-441
478-512
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00057 335-366
no_ID  
HMMPanther PTHR24015 FAMILY 8.2e-166 27-519
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 8.2e-166 27-519
Wolf-PSORT
Lj6g3v1995970.1	chlo 9, mito 2, plas 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1995970.1