Miyakogusa Predicted Gene

Lj6g3v1984610.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L9D9_SOYBN 942 84.6 88.2 (tr|I1L9D9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G22285.1 728 67.0 76.3 | Symbols: | Ubiquitin C-terminal hydrolases superfamily protein | chr4:11779063-11781898 REVERSE LENGTH=541
Medicago Medtr4g077490.1 889 80.6 84.3 | ubiquitin carboxyl-terminal hydrolase | HC | chr4:29656926-29662953 | 20130731
Soybean Glyma10g08500.2 942 84.6 88.2  
LJGI gnl|LJGI|FS321243 1183 100.0 100.0 homologue to UniRef100_A7QZY0 Cluster: Chromosome undetermined scaffold_292, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_292, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1984610.1 length: 559 aa.
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
method AccNumber shortName E-value location
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF00443 UCH 4.5e-39 222-555
ProfileScan PS50235 UCH_2_3 17.715 224-559
IPR001607 Zinc finger, UBP-type
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF02148 zf-UBP 1.5e-14 123-184
HMMSmart SM00290 Ubiquitin 3.9e-18 122-171
ProfileScan PS50271 ZF_UBP 18.266 121-182
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 4.3e-14 102-200
no_ID  
Coil coil coiled-coil NA 13-34
HMMPanther PTHR24006 FAMILY 1.3e-265 5-559
HMMPanther PTHR24006:SF87 SUBFAMILY 1.3e-265 5-559
Seg seg seg NA 4-18
78-88
388-403
superfamily SSF54001 Cysteine 3.2e-56 209-558
Wolf-PSORT
Lj6g3v1984610.1	cyto 10, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1984610.1