Miyakogusa Predicted Gene

Lj6g3v1984450.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MEU4_SOYBN 1159 75.4 86.0 (tr|I1MEU4) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G18750.1 788 54.3 72.8 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) superfamily protein | chr4:10304850-10307465 FORWARD LENGTH=871
Medicago Medtr8g086560.1 999 64.9 80.1 | PPR containing plant protein | HC | chr8:35911406-35914374 | 20130731
Soybean Glyma15g09120.1 1116 77.4 88.0  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1984450.1 length: 765 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.84 168-197
240-265
268-294
341-366
441-464
643-667
HMMPfam PF13041 PPR_2 8.4e-10 368-413
467-505
567-615
HMMTigr TIGR00756 PPR: 9.2e-05 168-199
240-268
369-403
440-464
470-498
570-604
605-638
ProfileScan PS51375 PPR 5.492 99-133
165-199
235-269
200-234
367-401
336-366
468-502
437-467
402-436
568-602
537-567
603-633
639-669
671-705
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.7e-07 662-723
no_ID  
HMMPanther PTHR24015 FAMILY 3.2e-234 119-739
HMMPanther PTHR24015:SF105SUBFAMILY NOT 3.2e-234 119-739
Seg seg seg NA 750-757
superfamily SSF48452 TPR-like 2e-05 669-730
Wolf-PSORT
Lj6g3v1984450.1	chlo 11, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1984450.1