Miyakogusa Predicted Gene

Lj6g3v1984370.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1MEV2_SOYBN 291 49.9 58.0 (tr|I1MEV2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G19790.1 66.2 78.8 97.0 | Symbols: RAP2.11 | related to AP2 11 | chr5:6689271-6690032 REVERSE LENGTH=253
Medicago Medtr2g016730.1 268 45.1 53.6 | AP2 domain class transcription factor | HC | chr2:5173691-5172338 | 20130731
Soybean Glyma13g29920.1 295 49.3 57.0  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1984370.1 length: 357 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 1.2e-07 32-43
54-70
Gene3D G3DSA:3.30.730.10 no description 6e-28 31-88
HMMPfam PF00847 AP2 1.2e-15 31-81
HMMSmart SM00380 DNA-binding 2.9e-35 31-94
ProfileScan PS51032 AP2_ERF 20.495 31-88
IPR016177 DNA-binding, integrase-type
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 1.3e-21 30-91
no_ID  
HMMPanther PTHR31677 FAMILY 6.5e-22 31-105
Seg seg seg NA 20-27
64-86
123-139
175-185
198-214
Wolf-PSORT
Lj6g3v1984370.1	nucl 11, chlo 1, plas 1, cysk 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1984370.1