Miyakogusa Predicted Gene
- Lj6g3v1949700.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IP40_MEDTR |
897 |
76.3 |
86.3 |
(tr|G7IP40) BTB/POZ domain-containing protein OS=Medicago truncatula GN=MTR_2g018750 PE=4 SV=1 |
| TAIR_pep |
AT5G03250.1 |
683 |
59.5 |
74.9 |
| Symbols: | Phototropic-responsive NPH3 family protein | chr5:774591-776855 FORWARD LENGTH=592 |
| Medicago |
Medtr2g018750.1 |
897 |
76.3 |
86.3 |
| phototropic-responsive NPH3 family protein | HC | chr2:5948194-5951612 | 20130731 |
| Soybean |
Glyma13g29300.1 |
872 |
75.0 |
84.4 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1949700.1 |
length: 572 aa. |
| IPR011333 |
BTB/POZ fold |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.30.710.10 |
no description |
0.00015 |
6-75 |
| superfamily |
SSF54695 |
POZ |
8e-08 |
6-92 |
| IPR027356 |
NPH3 domain |
| HMMPfam |
PF03000 |
NPH3 |
4.7e-90 |
170-432 |
| ProfileScan |
PS51649 |
NPH3 |
91.320 |
170-456 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
506-527 |
| HMMPanther |
PTHR32370 |
FAMILY |
6.2e-223 |
3-531 |
| HMMPanther |
PTHR32370:SF0 |
SUBFAMILY |
6.2e-223 |
3-531 |
| Seg |
seg |
seg |
NA |
146-155 |
- Wolf-PSORT
Lj6g3v1949700.1 nucl 6, chlo 3, nucl_plas 3, cyto 2, mito 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1949700.1 |
|