Miyakogusa Predicted Gene

Lj6g3v1946520.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MAG9_SOYBN 864 69.4 77.3 (tr|K7MAG9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G21070.1 451 54.7 72.0 | Symbols: ATBRCA1, BRCA1 | breast cancer susceptibility1 | chr4:11248174-11252633 FORWARD LENGTH=941
Medicago Medtr2g018880.1 816 65.8 75.2 | breast cancer susceptibility-like protein, putative | HC | chr2:6018865-6024557 | 20130731
Soybean Glyma13g29220.1 839 68.2 77.0  
LJGI gnl|LJGI|TC58582 1515 99.9 99.9 similar to UniRef100_A7Q1A3 Cluster: Chromosome chr10 scaffold_43, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_43, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1946520.1 length: 614 aa.
IPR001357 BRCT domain
method AccNumber shortName E-value location
Gene3D G3DSA:3.40.50.10190 no description 1.8e-26 397-500
507-608
HMMPfam PF00533 BRCT 8e-07 400-472
HMMSmart SM00292 breast 0.026 394-475
508-607
ProfileScan PS50172 BRCT 9.946 424-485
506-604
superfamily SSF52113 BRCT 7.4e-09 398-506
510-610
IPR001965 Zinc finger, PHD-type
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00249 PHD 0.00036 306-354
no_ID  
HMMPanther PTHR24171 FAMILY 8.9e-25 406-546
HMMPanther PTHR24171:SF0 SUBFAMILY 8.9e-25 406-546
HMMPfam PF13771 zf-HC5HC2H 7.5e-14 275-354
Seg seg seg NA 151-176
Wolf-PSORT
Lj6g3v1946520.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1946520.1