Miyakogusa Predicted Gene

Lj6g3v1946500.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1M1I2_SOYBN 426 75.5 81.6 (tr|I1M1I2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G05460.1 261 49.8 62.8 | Symbols: | RNI-like superfamily protein | chr4:2761106-2762400 REVERSE LENGTH=302
Medicago Medtr2g018910.1 346 61.2 74.5 | F-box/LRR protein | HC | chr2:6040628-6044118 | 20130731
Soybean Glyma13g29200.1 426 75.5 81.6  
LJGI gnl|LJGI|TC72224 1104 100.0 100.0 weakly similar to UniRef100_Q2HSK3 Cluster: Cyclin-like F-box; n=1; Medicago truncatula|Rep: Cyclin-like F-box - Medicago truncatula (Barrel medic), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1946500.1 length: 315 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
ProfileScan PS50181 FBOX 10.822 18-65
IPR006553 Leucine-rich repeat, cysteine-containing subtype
HMMSmart SM00367 Leucine-rich 46 113-138
195-219
220-243
no_ID  
Gene3D G3DSA:3.80.10.10 no description 3.9e-36 17-255
HMMPanther PTHR23125 F-BOX/LEUCINE 8.1e-87 14-261
HMMPanther PTHR23125:SF23 N7-RELATED 8.1e-87 14-261
HMMPfam PF12937 F-box-like 7.7e-07 21-66
HMMPfam PF13516 LRR_6 0.42 114-137
196-216
Seg seg seg NA 142-153
287-300
304-313
superfamily SSF52047 RNI-like 3.8e-23 38-235
Wolf-PSORT
Lj6g3v1946500.1	cyto 10, chlo 1, nucl 1, plas 1, extr 1, nucl_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1946500.1