Miyakogusa Predicted Gene

Lj6g3v1946380.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SG12_LOTJA 186 84.7 84.7 (tr|I3SG12) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
TAIR_pep AT4G18372.1 145 85.9 92.3 | Symbols: | Small nuclear ribonucleoprotein family protein | chr4:10151349-10151687 REVERSE LENGTH=112
Medicago Medtr2g019100.1 165 72.6 78.8 | small nuclear ribonucleoprotein | HC | chr2:6167136-6169763 | 20130731
Soybean Glyma13g29110.1 149 89.9 94.9  
LJGI gnl|LJGI|FS318316 668 100.0 100.0 similar to UniRef100_A7P4Z8 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (58%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1946380.1 length: 111 aa.
IPR001163 Ribonucleoprotein LSM domain
method AccNumber shortName E-value location
HMMPfam PF01423 LSM 7.8e-05 27-85
IPR010920 Like-Sm (LSM) domain
superfamily SSF50182 Sm-like 1e-11 18-102
no_ID  
Gene3D G3DSA:2.30.30.100 no description 4.3e-12 21-88
HMMPanther PTHR21617 UNCHARACTERIZED 1.2e-30 24-110
HMMPanther PTHR21617:SF0 SUBFAMILY 1.2e-30 24-110
Seg seg seg NA 16-32
Wolf-PSORT
Lj6g3v1946380.1	chlo 5, nucl 4, extr 3, cyto_nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1946380.1