Miyakogusa Predicted Gene

Lj6g3v1918320.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7ISH8_MEDTR 476 87.3 89.1 (tr|G7ISH8) RING finger and CHY zinc finger domain-containing protein OS=Medicago truncatula GN=MTR_2g020040 PE=4 SV=1
TAIR_pep AT5G18650.1 442 78.7 87.3 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc finger protein | chr5:6218260-6220374 FORWARD LENGTH=267
Medicago Medtr2g020040.1 476 87.3 89.1 | CHY and CTCHY and RING-type zinc finger protein | HC | chr2:6639730-6643639 | 20130731
Soybean Glyma15g10400.1 472 84.6 89.5  
LJGI gnl|LJGI|TC77593 686 100.0 100.0 similar to UniRef100_A7NW76 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (43%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1918320.1 length: 267 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 2.3e-06 152-197
HMMSmart SM00184 Ring 0.00018 153-195
ProfileScan PS50089 ZF_RING_2 11.147 153-196
IPR004039 Rubredoxin-type fold
Gene3D G3DSA:2.20.28.10 no description 2.3e-19 225-262
IPR008913 Zinc finger, CHY-type
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF05495 zf-CHY 3.8e-18 18-100
ProfileScan PS51266 ZF_CHY 25.614 11-86
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.2e-10 150-212
IPR017921 Zinc finger, CTCHY-type
ProfileScan PS51270 ZF_CTCHY 34.558 88-152
no_ID  
HMMPanther PTHR21319 RING 5.5e-136 1-266
Seg seg seg NA 92-103
superfamily SSF57850 RING/U-box 5.8e-10 148-211
Wolf-PSORT
Lj6g3v1918320.1	cyto 10, pero 2, mito 1, plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1918320.1