Miyakogusa Predicted Gene

Lj6g3v1918290.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr6

Full length sequence(26885540 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1MF65_SOYBN 640 78.5 83.1 (tr|I1MF65) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT5G18660.1 567 68.1 77.5 | Symbols: PCB2 | NAD(P)-binding Rossmann-fold superfamily protein | chr5:6220872-6222125 REVERSE LENGTH=417

Medicago Medtr2g020160.1 623 75.8 82.9 | 3,8-divinyl protochlorophyllide A 8-vinyl reductase | HC | chr2:6685512-6683942 | 20130731

Soybean Glyma15g10440.1 640 78.5 83.1

LJGI gnl|LJGI|TC69425 1574 99.9 99.9 similar to UniRef100_A7NW80 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (62%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj6g3v1918290.1 length: 412 aa.

IPR016040 NAD(P)-binding domain

method AccNumber shortName E-value location

Gene3D G3DSA:3.40.50.720 no description 2.6e-36 80-321

no_ID

Coil coil coiled-coil NA 208-229

HMMPanther PTHR14194 NITROGEN 2.4e-133 71-412

HMMPanther PTHR14194:SF9 PUTATIVE 2.4e-133 71-412

HMMPfam PF13460 NAD_binding_10 4.8e-23 81-286

Seg seg seg NA 19-31
140-151
218-229

superfamily SSF51735 NAD(P)-binding 9.4e-44 81-412

Wolf-PSORT

Lj6g3v1918290.1 chlo 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj6g3v1918290.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1MF65_SOYBN	640	78.5	83.1	(tr\|I1MF65) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT5G18660.1	567	68.1	77.5	\| Symbols: PCB2 \| NAD(P)-binding Rossmann-fold superfamily protein \| chr5:6220872-6222125 REVERSE LENGTH=417
Medicago	Medtr2g020160.1	623	75.8	82.9	\| 3,8-divinyl protochlorophyllide A 8-vinyl reductase \| HC \| chr2:6685512-6683942 \| 20130731
Soybean	Glyma15g10440.1	640	78.5	83.1
LJGI	gnl\|LJGI\|TC69425	1574	99.9	99.9	similar to UniRef100_A7NW80 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (62%)

IPR016040	NAD(P)-binding domain
Lj6g3v1918290.1				length: 412 aa.
method	AccNumber	shortName	E-value	location
Gene3D	G3DSA:3.40.50.720	no description	2.6e-36	80-321
no_ID
Coil	coil	coiled-coil	NA	208-229
HMMPanther	PTHR14194	NITROGEN	2.4e-133	71-412
HMMPanther	PTHR14194:SF9	PUTATIVE	2.4e-133	71-412
HMMPfam	PF13460	NAD_binding_10	4.8e-23	81-286
Seg	seg	seg	NA	19-31 140-151 218-229
superfamily	SSF51735	NAD(P)-binding	9.4e-44	81-412