Miyakogusa Predicted Gene

Lj6g3v1918240.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7ISK0_MEDTR 656 80.9 85.5 (tr|G7ISK0) Tubby-like F-box protein OS=Medicago truncatula GN=MTR_2g020280 PE=4 SV=1
TAIR_pep AT2G47900.2 541 64.3 76.3 | Symbols: AtTLP3, TLP3 | tubby like protein 3 | chr2:19611196-19612766 REVERSE LENGTH=406
Medicago Medtr2g020280.1 656 80.9 85.5 | tubby-F-box-like protein | HC | chr2:6738683-6733208 | 20130731
Soybean Glyma13g28620.1 645 80.1 84.5  
LJGI gnl|LJGI|TC62542 2337 100.0 100.0 similar to UniRef100_Q8VY21 Cluster: Tubby-like F-box protein 3; n=1; Arabidopsis thaliana|Rep: Tubby-like F-box protein 3 - Arabidopsis thaliana (Mouse-ear cress), partial (85%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1918240.1 length: 391 aa.
IPR000007 Tubby, C-terminal
method AccNumber shortName E-value location
FPrintScan PR01573 SUPERTUBBY 2.3e-79 154-170
170-194
219-246
303-320
321-337
348-367
369-391
Gene3D G3DSA:3.20.90.10 no description 1.2e-91 98-385
HMMPfam PF01167 Tub 3e-107 103-385
IPR001810 F-box domain, cyclin-like
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 2.4e-08 38-91
IPR018066 Tubby, C-terminal, conserved site
PatternScan PS01200 TUB_1 NA 321-334
PatternScan PS01201 TUB_2 NA 376-391
IPR025659 Tubby C-terminal-like domain
superfamily SSF54518 Tubby 8.1e-107 87-391
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 4.6e-05 35-83
HMMPanther PTHR16517 TUBBY-RELATED 1.3e-212 1-391
HMMPanther PTHR16517:SF7 TUBBY 1.3e-212 1-391
Seg seg seg NA 18-33
119-130
272-284
Wolf-PSORT
Lj6g3v1918240.1	chlo 4, nucl 4, mito 4, chlo_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1918240.1