Miyakogusa Predicted Gene

Lj6g3v1916080.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MF85_SOYBN 439 70.6 75.0 (tr|I1MF85) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G06330.3 215 44.5 54.5 | Symbols: | RING/U-box superfamily protein | chr3:1917334-1919330 FORWARD LENGTH=363
Medicago Medtr2g020520.1 398 64.6 73.4 | zinc finger protein | HC | chr2:6842371-6836281 | 20130731
Soybean Glyma15g10590.1 439 70.6 75.0  
LJGI gnl|LJGI|BF177830 890 99.8 99.8 similar to UniRef100_A7NWA0 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1916080.1 length: 315 aa.
IPR011016 Zinc finger, RING-CH-type
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF12906 RINGv 2.5e-13 214-260
HMMSmart SM00744 The 7.4e-20 213-261
ProfileScan PS51292 ZF_RING_CH 21.173 206-267
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.7e-15 208-264
no_ID  
HMMPanther PTHR23012 MEMBRANE 2.4e-79 70-315
HMMPanther PTHR23012:SF27 OS08G0384900 2.4e-79 70-315
Seg seg seg NA 182-194
200-212
271-292
superfamily SSF57850 RING/U-box 1.7e-13 206-267
Wolf-PSORT
Lj6g3v1916080.1	nucl 5, golg 3, chlo 2, cyto 2, vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1916080.1