Miyakogusa Predicted Gene

Lj6g3v1916060.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M1A4_SOYBN 1299 88.6 93.1 (tr|I1M1A4) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT4G15560.1 1212 86.5 93.1 | Symbols: CLA1, DEF, CLA, DXS, DXPS2 | Deoxyxylulose-5-phosphate synthase | chr4:8884218-8887254 FORWARD LENGTH=717
Medicago Medtr4g118640.1 1239 86.9 92.7 | 1-deoxy-D-xylulose-5-phosphate synthase | HC | chr4:49145064-49149426 | 20130731
Soybean Glyma07g38260.1 1267 89.6 94.7  
LJGI gnl|LJGI|TC82026 1974 100.0 100.0 homologue to UniRef100_Q6EJC9 Cluster: 1-deoxy-D-xylulose 5-phosphate synthase; n=1; Pueraria montana var. lobata|Rep: 1-deoxy-D-xylulose 5-phosphate synthase - Pueraria lobata (Kudzu vine), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1916060.1 length: 711 aa.
IPR005474 Transketolase, N-terminal
method AccNumber shortName E-value location
PatternScan PS00801 TRANSKETOLASE_1 NA 93-112
IPR005475 Transketolase-like, pyrimidine-binding domain
HMMPfam PF02779 Transket_pyr 2.6e-44 390-551
HMMSmart SM00861 Transketolase, 9.4e-68 390-555
IPR005476 Transketolase, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF02780 Transketolase_C 2.3e-30 569-692
IPR005477 Deoxyxylulose-5-phosphate synthase
Molecular Function GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity    
Biological Process GO:0016114 terpenoid biosynthetic process    
HAMAP MF_00315 DXP_synth 42.090 67-701
HMMPfam PF13292 DXP_synthase_N 1.6e-109 68-353
HMMTigr TIGR00204 dxs: 1.6e-229 70-700
IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF52922 TK 2.9e-35 563-702
IPR015941 Transketolase-like, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.920 no description 8.8e-32 570-700
IPR020826 Transketolase binding site
PatternScan PS00802 TRANSKETOLASE_2 NA 496-512
no_ID  
Gene3D G3DSA:3.40.50.970 no description 3e-37 310-404
405-569
HMMPanther PTHR11624 DEHYDROGENASE 0 71-710
HMMPanther PTHR11624:SF20 1-DEOXYXYLULOSE-5-PHOSPHATE 0 71-710
superfamily SSF52518 Thiamin 1.5e-64 65-452
386-579
Wolf-PSORT
Lj6g3v1916060.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1916060.1