Miyakogusa Predicted Gene

Lj6g3v1887910.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MFB8_SOYBN 218 49.2 60.3 (tr|I1MFB8) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G23880.1 94.7 30.5 47.3 | Symbols: | F-box and associated interaction domains-containing protein | chr3:8622061-8623155 REVERSE LENGTH=364
Medicago Medtr2g029990.1 210 47.2 57.9 | F-box protein interaction domain protein | HC | chr2:11236669-11238596 | 20130731
Soybean Glyma15g10860.1 218 49.2 60.3  
LJGI gnl|LJGI|TC65255 1205 100.0 100.0 similar to UniRef100_Q2HWB4 Cluster: Cyclin-like F-box; F-box protein interaction domain; n=1; Medicago truncatula|Rep: Cyclin-like F-box; F-box protein interaction domain - Medicago truncatula (Barrel medic), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1887910.1 length: 306 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 8.8e-11 28-71
HMMSmart SM00256 A 3e-09 32-72
ProfileScan PS50181 FBOX 11.061 26-72
superfamily SSF81383 F-box 3.1e-16 19-229
IPR017451 F-box associated interaction domain
HMMTigr TIGR01640 F_box_assoc_1: 8.1e-22 136-276
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 4.5e-10 27-68
HMMPanther PTHR31790 FAMILY 2.2e-19 32-268
Seg seg seg NA 19-33
108-118
163-174
204-209
Wolf-PSORT
Lj6g3v1887910.1	nucl 5, cyto 4, chlo 1, mito 1, plas 1, vacu 1, E.R. 1, chlo_mito 1, E.R._vacu 1, E.R._plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1887910.1