Miyakogusa Predicted Gene

Lj6g3v1882470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MFE5_SOYBN 395 74.3 84.2 (tr|I1MFE5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G06140.1 305 59.8 73.2 | Symbols: | RING/U-box superfamily protein | chr3:1856993-1858777 REVERSE LENGTH=359
Medicago Medtr2g022210.1 392 73.5 82.5 | zinc finger, C3HC4 type (RING finger) protein | HC | chr2:7631733-7637979 | 20130731
Soybean Glyma15g11100.1 395 74.3 84.2  
LJGI gnl|LJGI|TC60234 260 84.8 84.8 similar to UniRef100_A7NWF8 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (62%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1882470.1 length: 386 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 Ring 0.0013 330-368
ProfileScan PS50089 ZF_RING_2 11.280 330-369
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 3.7e-11 323-374
no_ID  
HMMPanther PTHR22996 MAHOGUNIN 2.5e-105 62-383
HMMPanther PTHR22996:SF0 SUBFAMILY 2.5e-105 62-383
HMMPfam PF13920 zf-C3HC4_3 2.8e-16 328-374
Seg seg seg NA 12-55
66-76
112-133
superfamily SSF57850 RING/U-box 5.2e-10 329-375
Wolf-PSORT
Lj6g3v1882470.1	nucl 6, cyto 4, chlo 2, cyto_E.R. 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1882470.1