Miyakogusa Predicted Gene

Lj6g3v1882460.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M146_SOYBN 387 89.2 98.0 (tr|I1M146) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G52210.2 332 80.3 89.4 | Symbols: ATARLB1, ATGB1, GB1 | GTP-binding protein 1 | chr5:21205567-21206840 FORWARD LENGTH=205
Medicago Medtr2g022200.1 381 89.3 97.1 | ADP-ribosylation factor-like protein A1D | HC | chr2:7631017-7626899 | 20130731
Soybean Glyma13g27940.3 387 89.2 98.0  
LJGI gnl|LJGI|TC69804 1225 100.0 100.0 similar to UniRef100_A7QX86 Cluster: Chromosome undetermined scaffold_215, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome undetermined scaffold_215, whole genome shotgun sequence - Vitis vinifera (Grape), partial (97%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1882460.1 length: 205 aa.
IPR003579 Small GTPase superfamily, Rab type
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 5e-05 18-187
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 6.9e-20 19-142
IPR006687 Small GTPase superfamily, SAR1-type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006886 intracellular protein transport    
HMMSmart SM00178 Sar1p-like 8.5e-15 2-200
IPR006689 Small GTPase superfamily, ARF/SAR type
Molecular Function GO:0005525 GTP binding    
FPrintScan PR00328 SAR1GTPBP 7e-10 19-42
126-147
HMMPfam PF00025 Arf 6.1e-48 10-183
IPR024156 Small GTPase superfamily, ARF type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00177 ARF-like 1.3e-37 1-188
ProfileScan PS51417 ARF 18.898 11-184
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.3e-41 15-190
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.5e-51 2-183
HMMPanther PTHR11711 ADP 9.7e-107 1-201
HMMPanther PTHR11711:SF19 ARF-RELATED 9.7e-107 1-201
Wolf-PSORT
Lj6g3v1882460.1	chlo 7, cyto 5.5, cyto_E.R. 3.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1882460.1