database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | Q76FX2_DAUCA | 150 | 64.5 | 80.9 | (tr|Q76FX2) CCAAT-box binding factor HAP5 homolog OS=Daucus carota GN=C-HAP5A PE=2 SV=1 |
TAIR_pep | AT1G56170.2 | 145 | 64.7 | 83.3 | | Symbols: HAP5B, ATHAP5B, NF-YC2 | nuclear factor Y, subunit C2 | chr1:21025118-21025717 FORWARD LENGTH=199 |
Medicago | Medtr2g023340.1 | 147 | 59.8 | 77.7 | | core histone H2A/H2B/H3/H4 | LC | chr2:8235750-8235016 | 20130731 |
Soybean | Glyma08g17630.1 | 145 | 61.9 | 81.9 | |
LJGI | --No_Hits-- |
Lj6g3v1880150.2 | length: 318 aa. | |||
IPR003958 | Transcription factor CBF/NF-Y/archaeal histone | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Cellular Component | GO:0005622 | intracellular | ||
Molecular Function | GO:0043565 | sequence-specific DNA binding | ||
HMMPfam | PF00808 | CBFD_NFYB_HMF | 4.9e-20 | 92-154 |
IPR009072 | Histone-fold | |||
Molecular Function | GO:0046982 | protein heterodimerization activity | ||
Gene3D | G3DSA:1.10.20.10 | no description | 3.5e-32 | 92-169 |
superfamily | SSF47113 | Histone-fold | 9.9e-29 | 19-164 |
IPR027170 | Transcriptional activator NFYC/HAP5 subunit | |||
Molecular Function | GO:0003700 | sequence-specific DNA binding transcription factor activity | ||
Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
Cellular Component | GO:0016602 | CCAAT-binding factor complex | ||
HMMPanther | PTHR10252:SF6 | CCAAT-BINDING | 7.6e-52 | 56-174 |
no_ID | ||||
HMMPanther | PTHR10252 | HISTONE-LIKE | 7.6e-52 | 56-174 |
Seg | seg | seg | NA | 52-71 209-222 233-246 250-263 282-302 |
Lj6g3v1880150.2 nucl 10, cyto 2, chlo 1, plas 1, cyto_pero 1, cyto_E.R. 1
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj6g3v1880150.2 |