Miyakogusa Predicted Gene

Lj6g3v1880080.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3STT9_LOTJA 431 80.7 80.7 (tr|I3STT9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G14220.1 127 36.3 47.5 | Symbols: RHF1A | RING-H2 group F1A | chr4:8196012-8198240 FORWARD LENGTH=371
Medicago Medtr2g022680.2 274 60.6 68.3 | E3 ubiquitin-protein ligase RHF2A, putative | HC | chr2:7872684-7868741 | 20130731
Soybean Glyma17g01920.1 237 56.2 64.7  
LJGI gnl|LJGI|TC78100 1475 98.1 98.1 similar to UniRef100_A7NWH6 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (39%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1880080.2 length: 264 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 1.4e-10 19-62
HMMSmart SM00184 Ring 6.3e-06 21-61
ProfileScan PS50089 ZF_RING_2 11.634 21-61
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 2.4e-14 9-84
no_ID  
HMMPanther PTHR22764 RING 5.8e-13 14-102
HMMPanther PTHR22764:SF25 OS04G0579200 5.8e-13 14-102
Seg seg seg NA 6-27
139-150
231-246
superfamily SSF57850 RING/U-box 2.9e-15 14-83
Wolf-PSORT
Lj6g3v1880080.2	nucl 9, extr 3, chlo 1, cyto 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1880080.2