Miyakogusa Predicted Gene

Lj6g3v1812150.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MFJ8_SOYBN 1235 78.2 86.4 (tr|I1MFJ8) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G04370.1 811 54.0 74.3 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:2134060-2136249 REVERSE LENGTH=729
Medicago Medtr2g024080.1 1196 75.2 85.2 | PPR containing plant-like protein | HC | chr2:8563899-8566215 | 20130731
Soybean Glyma15g11730.1 1182 80.5 88.8  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1812150.1 length: 774 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.091 210-236
238-267
513-536
541-571
576-603
617-636
HMMPfam PF13041 PPR_2 3.4e-11 137-182
336-384
438-485
HMMTigr TIGR00756 PPR: 0.00098 142-173
210-237
238-272
339-372
440-473
541-574
577-610
ProfileScan PS51375 PPR 5.831 37-71
138-172
107-137
72-106
236-270
205-235
271-305
337-371
306-336
372-406
438-472
407-437
473-507
539-573
508-538
574-609
610-640
676-710
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.4e-08 669-695
no_ID  
HMMPanther PTHR24015 FAMILY 4.1e-204 73-753
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 4.1e-204 73-753
Seg seg seg NA 25-40
84-95
Wolf-PSORT
Lj6g3v1812150.1	chlo 12, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1812150.1