Miyakogusa Predicted Gene
- Lj6g3v1787870.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1KZX3_SOYBN |
491 |
82.1 |
88.0 |
(tr|I1KZX3) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G20300.1 |
351 |
60.2 |
74.7 |
| Symbols: | Protein of unknown function (DUF3537) | chr3:7079832-7081809 REVERSE LENGTH=452 |
| Medicago |
Medtr2g025160.1 |
485 |
81.2 |
86.2 |
| extracellular ligand-gated ion channel protein | HC | chr2:8949512-8952434 | 20130731 |
| Soybean |
Glyma09g01140.1 |
491 |
82.1 |
88.0 |
|
| LJGI |
gnl|LJGI|TC67681 |
1733 |
99.6 |
99.6 |
similar to UniRef100_Q2HTI8 Cluster: AT3g20300/MQC12_5; n=1; Medicago truncatula|Rep: AT3g20300/MQC12_5 - Medicago truncatula (Barrel medic), partial (94%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1787870.2 |
length: 298 aa. |
| IPR021924 |
Protein of unknown function DUF3537 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF12056 |
DUF3537 |
1.4e-133 |
1-283 |
| no_ID |
|
| HMMPanther |
PTHR31963 |
FAMILY |
3.1e-113 |
5-298 |
| HMMPanther |
PTHR31963:SF0 |
SUBFAMILY |
3.1e-113 |
5-298 |
| Seg |
seg |
seg |
NA |
223-234 |
- Wolf-PSORT
Lj6g3v1787870.2 plas 6, E.R. 3, golg 3, nucl_plas 3, cysk_plas 3, mito_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1787870.2 |
|