Miyakogusa Predicted Gene
- Lj6g3v1753380.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T7V1_LOTJA |
90.1 |
46.0 |
60.0 |
(tr|I3T7V1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G42905.1 |
67.4 |
34.0 |
51.5 |
| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr5:17201414-17202323 REVERSE LENGTH=258 |
| Medicago |
Medtr1g046400.1 |
66.2 |
43.2 |
61.7 |
| hypothetical protein | LC | chr1:17488301-17488678 | 20130731 |
| Soybean |
Glyma07g34840.1 |
65.1 |
33.0 |
48.5 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1753380.1 |
length: 124 aa. |
| IPR002156 |
Ribonuclease H domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003676 |
nucleic acid binding |
|
|
| Molecular Function |
GO:0004523 |
ribonuclease H activity |
|
|
| ProfileScan |
PS50879 |
RNASE_H |
9.052 |
9-124 |
| IPR012337 |
Ribonuclease H-like domain |
| Molecular Function |
GO:0003676 |
nucleic acid binding |
|
|
| superfamily |
SSF53098 |
Ribonuclease |
2.4e-14 |
9-92 |
| no_ID |
|
| Gene3D |
G3DSA:3.30.420.10 |
no description |
8.7e-09 |
12-96 |
| HMMPfam |
PF13456 |
RVT_3 |
1.3e-07 |
55-103 |
- Wolf-PSORT
Lj6g3v1753380.1 chlo 4, nucl 3, cyto 3, cyto_nucl 3, chlo_mito 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1753380.1 |
|