database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | G7IP95_MEDTR | 702 | 74.3 | 82.2 | (tr|G7IP95) RNA-binding protein, putative OS=Medicago truncatula GN=MTR_2g026180 PE=4 SV=1 |
TAIR_pep | AT3G07810.1 | 398 | 63.6 | 74.1 | | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:2492875-2495052 FORWARD LENGTH=494 |
Medicago | Medtr2g026180.2 | 700 | 74.4 | 82.1 | | RNA-binding (RRM/RBD/RNP motif) family protein | HC | chr2:9465398-9461370 | 20130731 |
Soybean | Glyma02g47690.2 | 484 | 56.9 | 65.4 | |
LJGI | gnl|LJGI|TC58641 | 2827 | 99.9 | 99.9 | similar to UniRef100_A7R1X0 Cluster: Chromosome undetermined scaffold_383, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_383, whole genome shotgun sequence - Vitis vinifera (Grape), partial (58%) |
Lj6g3v1752990.1 | length: 477 aa. | |||
IPR000504 | RNA recognition motif domain | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0003676 | nucleic acid binding | ||
HMMPfam | PF00076 | RRM_1 | 1e-18 | 8-75 110-176 |
HMMSmart | SM00360 | RNA | 7.7e-25 | 7-78 109-181 |
ProfileScan | PS50102 | RRM | 18.564 | 6-82 108-185 |
IPR012677 | Nucleotide-binding, alpha-beta plait | |||
Molecular Function | GO:0000166 | nucleotide binding | ||
Gene3D | G3DSA:3.30.70.330 | no description | 1.1e-25 | 5-87 92-191 |
no_ID | ||||
HMMPanther | PTHR24012 | FAMILY | 1.5e-130 | 1-441 |
HMMPanther | PTHR24012:SF27 | SUBFAMILY | 1.5e-130 | 1-441 |
Seg | seg | seg | NA | 88-105 342-359 |
superfamily | SSF54928 | RNA-binding | 1.3e-24 | 102-204 1-101 |
Lj6g3v1752990.1 nucl 14
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj6g3v1752990.1 |