Miyakogusa Predicted Gene
- Lj6g3v1732740.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B5U9W2_LOTJA |
78.6 |
49.2 |
80.0 |
(tr|B5U9W2) Putative uncharacterized protein OS=Lotus japonicus PE=4 SV=1 |
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
--No_Hits--
|
|
|
|
|
| Soybean |
Glyma03g13310.1 |
85.1 |
58.6 |
70.0 |
|
| LJGI |
gnl|LJGI|GO040426 |
50.1 |
100.0 |
100.0 |
similar to UniRef100_A7BS46 Cluster: Transposase, IS4; n=1; Beggiatoa sp. PS|Rep: Transposase, IS4 - Beggiatoa sp. PS, partial (8%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1732740.1 |
length: 72 aa. |
| IPR000953 |
Chromo domain/shadow |
| method |
AccNumber |
shortName |
E-value |
location |
| ProfileScan |
PS50013 |
CHROMO_2 |
9.643 |
10-48 |
| IPR016197 |
Chromo domain-like |
| superfamily |
SSF54160 |
Chromo |
2.3e-06 |
4-55 |
| IPR023780 |
Chromo domain |
| HMMPfam |
PF00385 |
Chromo |
2.8e-09 |
11-55 |
| no_ID |
|
| Gene3D |
G3DSA:2.40.50.40 |
no description |
1.2e-05 |
13-48 |
- Wolf-PSORT
Lj6g3v1732740.1 cyto 5, nucl 4, extr 3, chlo 2, cysk_nucl 2, nucl_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1732740.1 |
|