Miyakogusa Predicted Gene
- Lj6g3v1720560.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S9N8_LOTJA |
212 |
85.2 |
85.2 |
(tr|I3S9N8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G46900.1 |
73.2 |
45.0 |
54.3 |
| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr5:19039954-19040337 REVERSE LENGTH=127 |
| Medicago |
Medtr2g026760.1 |
117 |
56.0 |
65.6 |
| Lipid transfer protein | HC | chr2:9738340-9739226 | 20130731 |
| Soybean |
Glyma09g01680.1 |
137 |
63.9 |
70.5 |
|
| LJGI |
gnl|LJGI|TC58853 |
767 |
100.0 |
100.0 |
similar to UniRef100_Q43522 Cluster: Tfm5 protein; n=1; Solanum lycopersicum|Rep: Tfm5 protein - Solanum lycopersicum (Tomato) (Lycopersicon esculentum), partial (37%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1720560.1 |
length: 128 aa. |
| IPR016140 |
Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF14368 |
LTP_2 |
3.5e-05 |
41-127 |
| HMMSmart |
SM00499 |
Plant |
6.7e-06 |
45-127 |
| superfamily |
SSF47699 |
Bifunctional |
4.6e-19 |
47-128 |
| no_ID |
|
| Gene3D |
G3DSA:1.10.110.10 |
no description |
1.1e-26 |
43-128 |
| HMMPanther |
PTHR31731 |
FAMILY |
3.5e-39 |
1-128 |
| Seg |
seg |
seg |
NA |
81-99 |
- Wolf-PSORT
Lj6g3v1720560.1 chlo 4, nucl 2, cyto 2, plas 2, E.R. 2, cyto_nucl 2, chlo_mito 2, nucl_plas 2, E.R._plas 2, cyto_E.R. 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1720560.1 |
|