Miyakogusa Predicted Gene
- Lj6g3v1708410.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SE30_LOTJA |
439 |
99.5 |
100.0 |
(tr|I3SE30) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G47770.1 |
377 |
81.4 |
92.4 |
| Symbols: FPS1 | farnesyl diphosphate synthase 1 | chr5:19345297-19347415 FORWARD LENGTH=384 |
| Medicago |
Medtr2g027300.1 |
426 |
93.8 |
99.0 |
| geranylgeranyl pyrophosphate synthase | HC | chr2:9968618-9972615 | 20130731 |
| Soybean |
Glyma09g01820.2 |
435 |
93.6 |
98.6 |
|
| LJGI |
gnl|LJGI|TC64195 |
1273 |
99.3 |
99.3 |
similar to UniRef100_P49351 Cluster: Farnesyl pyrophosphate synthetase 1 (FPP synthetase 1) (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase ; Geranyltranstransferase ]; n=1; Lupinus albus|Rep: Farnesyl pyrophosphate synthetase 1 (FPP synthetase 1) (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase ; Geranyltranstransferase ] - Lupinus albus (White lupin), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1708410.1 |
length: 220 aa. |
| IPR000092 |
Polyprenyl synthetase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0008299 |
isoprenoid biosynthetic process |
|
|
| HMMPfam |
PF00348 |
polyprenyl_synt |
3.5e-66 |
1-210 |
| PatternScan |
PS00444 |
POLYPRENYL_SYNTHASE_2 |
NA |
187-199 |
| PatternScan |
PS00723 |
POLYPRENYL_SYNTHASE_1 |
NA |
53-67 |
| IPR008949 |
Terpenoid synthase |
| Gene3D |
G3DSA:1.10.600.10 |
no description |
4.3e-76 |
1-210 |
| superfamily |
SSF48576 |
Terpenoid |
1.2e-61 |
1-209 |
| no_ID |
|
| HMMPanther |
PTHR11525 |
FARNESYL-PYROPHOSPHATE |
5e-135 |
1-210 |
| HMMPanther |
PTHR11525:SF0 |
SUBFAMILY |
5e-135 |
1-210 |
- Wolf-PSORT
Lj6g3v1708410.1 cyto 9, mito 2, nucl 1, plas 1, cysk 1, chlo_mito 1, cyto_mito 1, cysk_nucl 1, nucl_plas 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1708410.1 |
|