Miyakogusa Predicted Gene

Lj6g3v1707220.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JA00_MEDTR 683 46.5 63.7 (tr|G7JA00) NBS-containing resistance-like protein OS=Medicago truncatula GN=MTR_3g069210 PE=4 SV=1
TAIR_pep AT3G07040.1 320 28.8 47.5 | Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926
Medicago Medtr3g069210.1 683 46.5 63.7 | NB-ARC domain disease resistance protein | HC | chr3:30990418-30987078 | 20130731
Soybean Glyma0589s00200.1 670 45.7 60.7  
LJGI gnl|LJGI|GO036841 1356 98.3 98.3 similar to UniRef100_A7QA99 Cluster: Chromosome undetermined scaffold_70, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_70, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1707220.1 length: 868 aa.
IPR000767 Disease resistance protein
method AccNumber shortName E-value location
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 5.2e-16 157-172
235-249
333-347
835-851
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 1.6e-69 138-427
IPR025875 Leucine rich repeat 4
HMMPfam PF12799 LRR_4 7.6e-07 577-606
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 5.6e-35 117-371
no_ID  
Gene3D G3DSA:3.40.50.300 no description 4.3e-13 141-312
Gene3D G3DSA:3.80.10.10 no description 1.3e-25 567-855
HMMPanther PTHR23155 LEUCINE-RICH 5.4e-163 1-845
HMMPanther PTHR23155:SF152OS06G0287700 PROTEIN 5.4e-163 1-845
Seg seg seg NA 99-111
448-459
597-608
superfamily SSF52058 L 3.7e-39 467-847
Wolf-PSORT
Lj6g3v1707220.1	cyto 7, nucl 4, vacu 2, cysk_nucl 2, nucl_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1707220.1