Miyakogusa Predicted Gene

Lj6g3v1705080.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7MAY3_SOYBN 901 64.7 72.0 (tr|K7MAY3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G13300.1 487 39.9 53.8 | Symbols: VCS | Transducin/WD40 repeat-like superfamily protein | chr3:4304085-4309949 FORWARD LENGTH=1344
Medicago Medtr2g027690.2 829 59.6 67.1 | enhancer of mRNA-decapping-like protein | HC | chr2:10141676-10152198 | 20130731
Soybean Glyma09g01960.1 894 64.5 71.9  
LJGI gnl|LJGI|DC597651 1136 100.0 100.0 similar to UniRef100_A2Q5F8 Cluster: Peptidase S26A, signal peptidase I; WD40-like; n=1; Medicago truncatula|Rep: Peptidase S26A, signal peptidase I; WD40-like - Medicago truncatula (Barrel medic), partial (11%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1705080.1 length: 723 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
ProfileScan PS50082 WD_REPEATS_2 9.038 9-31
IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily
superfamily SSF50998 Quinoprotein 6.1e-06 7-94
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 2e-07 5-139
no_ID  
Coil coil coiled-coil NA 628-649
HMMPanther PTHR15598 AUTOANTIGEN 3.5e-97 1-723
HMMPanther PTHR15598:SF5 SUBFAMILY 3.5e-97 1-723
Seg seg seg NA 284-313
352-365
410-421
521-550
660-685
Wolf-PSORT
Lj6g3v1705080.1	nucl 8, cyto 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1705080.1