Miyakogusa Predicted Gene

Lj6g3v1695010.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MAY6_SOYBN 760 72.1 75.0 (tr|K7MAY6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G38970.1 89.0 41.7 63.0 | Symbols: | Zinc finger (C3HC4-type RING finger) family protein | chr2:16274135-16276651 FORWARD LENGTH=692
Medicago Medtr2g027780.1 744 71.0 75.5 | zinc finger, C3HC4 type (RING finger) protein | HC | chr2:10188015-10192101 | 20130731
Soybean Glyma09g02020.1 747 71.3 74.6  
LJGI gnl|LJGI|TC77734 624 99.7 99.7 similar to UniRef100_A2Q5E8 Cluster: Zinc finger, RING-type; n=1; Medicago truncatula|Rep: Zinc finger, RING-type - Medicago truncatula (Barrel medic), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1695010.1 length: 562 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 4.3e-10 95-145
HMMSmart SM00184 Ring 2.4e-07 95-143
ProfileScan PS50089 ZF_RING_2 11.722 95-144
IPR002035 von Willebrand factor, type A
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:3.40.50.410 no description 6.6e-06 296-418
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 3.3e-11 88-150
no_ID  
HMMPanther PTHR11210 RING 2.9e-121 92-417
HMMPanther PTHR11210:SF17 OS06G0687200 2.9e-121 92-417
Seg seg seg NA 2-10
17-31
68-79
196-207
242-265
410-423
456-472
498-510
superfamily SSF53300 vWA-like 2.1e-14 285-442
superfamily SSF57850 RING/U-box 1.6e-14 66-169
Wolf-PSORT
Lj6g3v1695010.1	chlo 6, nucl 4, cyto 2, nucl_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1695010.1