Miyakogusa Predicted Gene

Lj6g3v1692680.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S869_LOTJA 426 91.2 91.2 (tr|I3S869) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G33120.1 336 81.6 90.5 | Symbols: SAR1, VAMP722, ATVAMP722 | synaptobrevin-related protein 1 | chr2:14043785-14045337 REVERSE LENGTH=221
Medicago Medtr2g028790.1 383 83.9 88.0 | synaptobrevin-like protein | HC | chr2:10690943-10695600 | 20130731
Soybean Glyma09g02310.1 379 83.7 88.8  
LJGI gnl|LJGI|TC69093 1350 100.0 100.0 similar to UniRef100_A7QKU3 Cluster: Chromosome undetermined scaffold_114, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_114, whole genome shotgun sequence - Vitis vinifera (Grape), partial (97%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1692680.1 length: 226 aa.
IPR001388 Synaptobrevin
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0016192 vesicle-mediated transport    
FPrintScan PR00219 SYNAPTOBREVN 8.2e-20 142-161
162-181
198-217
HMMPfam PF00957 Synaptobrevin 3.4e-32 136-220
PatternScan PS00417 SYNAPTOBREVIN NA 155-174
ProfileScan PS50892 V_SNARE 18.683 137-197
IPR010908 Longin domain
Gene3D G3DSA:3.30.450.50 no description 4.8e-44 6-116
HMMPfam PF13774 Longin 1.3e-23 39-118
ProfileScan PS50859 LONGIN 27.599 17-121
IPR011012 Longin-like domain
Biological Process GO:0006810 transport    
superfamily SSF64356 SNARE-like 2.1e-29 12-129
no_ID  
Gene3D G3DSA:1.10.3840.10 no description 1.4e-47 117-220
HMMPanther PTHR21136 SNARE 1e-114 10-223
HMMPanther PTHR21136:SF8 VAMP-7 1e-114 10-223
Seg seg seg NA 200-218
Wolf-PSORT
Lj6g3v1692680.1	cyto_nucl 4, nucl 3.5, cyto 3.5, plas 3, chlo 1, mito 1, pero 1, golg 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1692680.1