Miyakogusa Predicted Gene

Lj6g3v1692560.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L0B2_SOYBN 786 75.3 82.1 (tr|I1L0B2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G19670.2 543 55.6 71.0 | Symbols: | RING/U-box superfamily protein | chr4:10699383-10701342 REVERSE LENGTH=532
Medicago Medtr2g028870.1 727 76.6 84.2 | C6HC-type zinc finger RING/U-box protein | HC | chr2:10740321-10734195 | 20130731
Soybean Glyma09g02340.1 786 75.3 82.1  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1692560.1 length: 520 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS50089 ZF_RING_2 10.439 201-245
IPR002867 Zinc finger, C6HC-type
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF01485 IBR 2.7e-06 280-340
362-409
HMMSmart SM00647 In 0.084 268-340
350-409
IPR017907 Zinc finger, RING-type, conserved site
PatternScan PS00518 ZF_RING_1 NA 218-227
no_ID  
HMMPanther PTHR11685 ARIADNE 3.7e-121 1-417
HMMPanther PTHR11685:SF48 SUBFAMILY 3.7e-121 1-417
HMMPfam PF13456 RVT_3 1.8e-05 103-170
Seg seg seg NA 8-21
299-320
superfamily SSF57850 RING/U-box 4.3e-05 350-421
194-291
267-344
Wolf-PSORT
Lj6g3v1692560.1	nucl 11, cyto 1, vacu 1, pero 1, cyto_pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1692560.1