Miyakogusa Predicted Gene

Lj6g3v1690540.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MG10_SOYBN 303 90.3 95.5 (tr|I1MG10) Protein ROOT HAIR DEFECTIVE 3 homolog OS=Glycine max PE=3 SV=1
TAIR_pep AT3G13870.1 278 84.4 90.3 | Symbols: RHD3 | Root hair defective 3 GTP-binding protein (RHD3) | chr3:4565762-4571109 REVERSE LENGTH=802
Medicago Medtr2g029340.1 298 89.1 93.6 | ROOT HAIR defective 3 GTP-binding family protein | HC | chr2:10952430-10963961 | 20130731
Soybean Glyma15g13380.1 303 90.3 95.5  
LJGI gnl|LJGI|TC60905 896 99.4 99.4 similar to UniRef100_Q6Q625 Cluster: Root hair defective 3 GTP-binding protein; n=1; Triticum aestivum|Rep: Root hair defective 3 GTP-binding protein - Triticum aestivum (Wheat), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1690540.1 length: 180 aa.
IPR008803 RHD3/Sey1
method AccNumber shortName E-value location
HMMPfam PF05879 RHD3 2.3e-68 47-158
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 2.6e-25 7-163
no_ID  
Gene3D G3DSA:3.40.50.300 no description 4.4e-23 10-156
HMMPanther PTHR31695 FAMILY 4e-52 4-155
HMMPanther PTHR31695:SF0 SUBFAMILY 4e-52 4-155
Wolf-PSORT
Lj6g3v1690540.1	nucl 4, chlo 3, cyto_nucl 3, cysk_nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1690540.1