Miyakogusa Predicted Gene

Lj6g3v1654310.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1MG30_SOYBN 869 86.1 89.0 (tr|I1MG30) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT2G34710.1 777 76.0 82.3 | Symbols: PHB, ATHB14, ATHB-14, PHB-1D | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | chr2:14639548-14643993 REVERSE LENGTH=852
Medicago Medtr2g030130.1 855 85.2 88.3 | class III homeodomain leucine zipper protein | HC | chr2:11288103-11282650 | 20130731
Soybean Glyma15g13640.1 862 86.0 88.9  
LJGI gnl|LJGI|AV781096 115 86.9 86.9 homologue to UniRef100_A7NZJ8 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1654310.1 length: 488 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 2e-16 17-75
HMMSmart SM00389 Homeodomain 8.6e-16 14-80
ProfileScan PS50071 HOMEOBOX_2 15.742 12-76
IPR002913 START domain
HMMPfam PF01852 START 3.2e-51 165-372
HMMSmart SM00234 in 1.2e-50 164-374
ProfileScan PS50848 START 24.579 155-356
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 5.8e-18 7-75
superfamily SSF46689 Homeodomain-like 2e-16 5-87
IPR023393 START-like domain
Gene3D G3DSA:3.30.530.20 no description 6.1e-21 163-368
no_ID  
Coil coil coiled-coil NA 86-107
HMMPanther PTHR24326 FAMILY 4.2e-91 5-297
HMMPanther PTHR24326:SF63 SUBFAMILY 4.2e-91 5-297
Seg seg seg NA 136-153
296-309
331-342
superfamily SSF55961 Bet 3.2e-36 163-376
Wolf-PSORT
Lj6g3v1654310.1	nucl 5, chlo 4, cyto 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1654310.1