Miyakogusa Predicted Gene
- Lj6g3v1642220.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1L0F0_SOYBN |
584 |
81.0 |
89.4 |
(tr|I1L0F0) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G30520.1 |
404 |
56.2 |
72.3 |
| Symbols: AAE14 | acyl-activating enzyme 14 | chr1:10811039-10813546 FORWARD LENGTH=560 |
| Medicago |
Medtr2g030240.1 |
584 |
80.7 |
88.2 |
| 2-succinylbenzoate-CoA ligase/peroxisomal protein | HC | chr2:11342493-11346176 | 20130731 |
| Soybean |
Glyma09g02840.1 |
584 |
81.0 |
89.4 |
|
| LJGI |
gnl|LJGI|TC76529 |
400 |
99.5 |
99.5 |
similar to UniRef100_Q6AFL8 Cluster: Integral membrane protein; n=1; Leifsonia xyli subsp. xyli|Rep: Integral membrane protein - Leifsonia xyli subsp. xyli, partial (6%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1642220.1 |
length: 379 aa. |
| IPR000873 |
AMP-dependent synthetase/ligase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0008152 |
metabolic process |
|
|
| HMMPfam |
PF00501 |
AMP-binding |
4.2e-47 |
32-284 |
| no_ID |
|
| Gene3D |
G3DSA:2.30.38.10 |
no description |
8.7e-10 |
183-254 |
| Gene3D |
G3DSA:3.30.300.30 |
no description |
2.4e-23 |
258-374 |
| Gene3D |
G3DSA:3.40.50.980 |
no description |
2.2e-23 |
33-153 |
| HMMPanther |
PTHR24095 |
FAMILY |
7.4e-135 |
33-370 |
| HMMPanther |
PTHR24095:SF22 |
SUBFAMILY |
7.4e-135 |
33-370 |
| superfamily |
SSF56801 |
Acetyl-CoA |
3.2e-71 |
33-371 |
- Wolf-PSORT
Lj6g3v1642220.1 mito 3, E.R. 3, chlo 2, nucl 2, E.R._vacu 2, E.R._plas 2, mito_plas 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1642220.1 |
|