Miyakogusa Predicted Gene

Lj6g3v1629780.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L0G0_SOYBN 724 69.1 80.6 (tr|I1L0G0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G03300.3 542 55.5 69.7 | Symbols: DCL2 | dicer-like 2 | chr3:768020-774833 REVERSE LENGTH=1388
Medicago Medtr8g069975.1 682 65.8 78.2 | endoribonuclease dicer-like protein | HC | chr8:29673147-29681500 | 20130731
Soybean Glyma09g02930.1 724 69.1 80.6  
LJGI gnl|LJGI|DC594538 83.8 100.0 100.0 similar to UniRef100_Q1KL58 Cluster: Dicer-like 2 spliceform 1; n=1; Arabidopsis thaliana|Rep: Dicer-like 2 spliceform 1 - Arabidopsis thaliana (Mouse-ear cress), partial (4%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1629780.1 length: 504 aa.
IPR001650 Helicase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 6.1e-15 375-432
HMMSmart SM00490 helicase 1.9e-09 348-435
ProfileScan PS51194 HELICASE_CTER 11.853 318-482
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 9.1e-10 12-136
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
ProfileScan PS51192 HELICASE_ATP_BIND_1 16.476 1-155
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.1e-40 14-457
no_ID  
Gene3D G3DSA:3.40.50.300 no description 8.6e-19 15-136
318-458
HMMPanther PTHR14950 HELICASE-RELATED 1.6e-210 1-504
HMMPanther PTHR14950:SF4 HELICASE-RELATED 1.6e-210 1-504
Seg seg seg NA 15-29
197-208
Wolf-PSORT
Lj6g3v1629780.1	chlo 7, cyto 2, mito 2, nucl 1, plas 1, extr 1, cyto_mito 1, nucl_plas 1, cyto_pero 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1629780.1