Miyakogusa Predicted Gene
- Lj6g3v1629660.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
M5VNG4_PRUPE |
472 |
72.6 |
86.8 |
(tr|M5VNG4) Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa018158mg PE=4 SV=1 |
| TAIR_pep |
AT3G19430.1 |
391 |
62.5 |
78.1 |
| Symbols: | late embryogenesis abundant protein-related / LEA protein-related | chr3:6736382-6738330 REVERSE LENGTH=559 |
| Medicago |
Medtr2g030825.1 |
489 |
76.8 |
89.3 |
| late embryogenesis abundant (LEA)-like protein | LC | chr2:11653982-11656243 | 20130731 |
| Soybean |
Glyma13g35710.1 |
248 |
41.7 |
58.3 |
|
| LJGI |
gnl|LJGI|AV406674 |
446 |
91.5 |
91.5 |
weakly similar to UniRef100_Q9LT74 Cluster: Similarity to late embryogenesis abundant protein; n=2; Arabidopsis thaliana|Rep: Similarity to late embryogenesis abundant protein - Arabidopsis thaliana (Mouse-ear cress), partial (6%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1629660.1 |
length: 369 aa. |
| IPR009646 |
Root cap |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF06830 |
Root_cap |
9.5e-27 |
281-338 |
| no_ID |
|
| HMMPanther |
PTHR31656 |
FAMILY |
3.6e-143 |
83-369 |
| HMMPanther |
PTHR31656:SF0 |
SUBFAMILY |
3.6e-143 |
83-369 |
| Seg |
seg |
seg |
NA |
12-27 |
- Wolf-PSORT
Lj6g3v1629660.1 extr 5, chlo 4, E.R. 2, cyto 1, mito 1, vacu 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1629660.1 |
|