Miyakogusa Predicted Gene
- Lj6g3v1629650.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IMK7_MEDTR |
115 |
81.9 |
88.9 |
(tr|G7IMK7) Germin-like protein subfamily 1 member OS=Medicago truncatula GN=MTR_2g031270 PE=4 SV=1 |
| TAIR_pep |
AT5G39160.3 |
73.2 |
54.4 |
69.1 |
| Symbols: | RmlC-like cupins superfamily protein | chr5:15679195-15679970 REVERSE LENGTH=218 |
| Medicago |
Medtr2g031270.1 |
115 |
81.9 |
88.9 |
| rhicadhesin receptor | HC | chr2:11720872-11719359 | 20130731 |
| Soybean |
Glyma09g03010.1 |
113 |
77.5 |
83.1 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1629650.1 |
length: 89 aa. |
| IPR011051 |
RmlC-like cupin domain |
| method |
AccNumber |
shortName |
E-value |
location |
| superfamily |
SSF51182 |
RmlC-like |
7.9e-07 |
42-89 |
| IPR014710 |
RmlC-like jelly roll fold |
| Gene3D |
G3DSA:2.60.120.10 |
no description |
7.7e-13 |
24-89 |
| no_ID |
|
| HMMPanther |
PTHR31238 |
FAMILY |
9.2e-25 |
1-89 |
| Seg |
seg |
seg |
NA |
4-20 |
- Wolf-PSORT
Lj6g3v1629650.1 extr 9, vacu 2, chlo 1, cyto 1, mito 1, chlo_mito 1, E.R._vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1629650.1 |
|