Miyakogusa Predicted Gene
- Lj6g3v1629490.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1L0H6_SOYBN |
514 |
81.5 |
87.4 |
(tr|I1L0H6) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G30760.1 |
409 |
66.3 |
79.6 |
| Symbols: | FAD-binding Berberine family protein | chr1:10918321-10920441 FORWARD LENGTH=534 |
| Medicago |
Medtr2g031390.1 |
502 |
81.3 |
89.1 |
| FAD-binding berberine family protein | HC | chr2:11787944-11785737 | 20130731 |
| Soybean |
Glyma09g03090.1 |
514 |
81.5 |
87.4 |
|
| LJGI |
gnl|LJGI|TC79205 |
759 |
96.4 |
96.4 |
similar to UniRef100_A7Q4S5 Cluster: Chromosome chr10 scaffold_50, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_50, whole genome shotgun sequence - Vitis vinifera (Grape), partial (34%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1629490.1 |
length: 306 aa. |
| IPR016166 |
FAD-binding, type 2 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Molecular Function |
GO:0016614 |
oxidoreductase activity, acting on CH-OH group of donors |
|
|
| Molecular Function |
GO:0050660 |
flavin adenine dinucleotide binding |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| superfamily |
SSF56176 |
FAD-binding |
8.1e-14 |
4-60 |
| no_ID |
|
| HMMPanther |
PTHR32448 |
FAMILY |
6.7e-137 |
1-291 |
| Seg |
seg |
seg |
NA |
34-52 |
- Wolf-PSORT
Lj6g3v1629490.1 cyto 9, nucl 1, mito 1, plas 1, E.R. 1, cysk 1, cysk_nucl 1, nucl_plas 1, cysk_plas 1, E.R._plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1629490.1 |
|