Miyakogusa Predicted Gene

Lj6g3v1629450.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L0H6_SOYBN 936 85.5 91.3 (tr|I1L0H6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G30760.1 682 64.7 77.4 | Symbols: | FAD-binding Berberine family protein | chr1:10918321-10920441 FORWARD LENGTH=534
Medicago Medtr2g031390.1 934 85.6 90.8 | FAD-binding berberine family protein | HC | chr2:11787944-11785737 | 20130731
Soybean Glyma09g03090.1 936 85.5 91.3  
LJGI gnl|LJGI|TC79852 1463 100.0 100.0 similar to UniRef100_A7Q4S5 Cluster: Chromosome chr10 scaffold_50, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_50, whole genome shotgun sequence - Vitis vinifera (Grape), partial (37%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1629450.1 length: 543 aa.
IPR006094 FAD linked oxidase, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0008762 UDP-N-acetylmuramate dehydrogenase activity    
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF01565 FAD_binding_4 7e-28 76-215
IPR012951 Berberine/berberine-like
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08031 BBE 9.5e-23 468-525
IPR016166 FAD-binding, type 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
ProfileScan PS51387 FAD_PCMH 18.463 72-248
superfamily SSF56176 FAD-binding 3.6e-45 11-249
IPR016167 FAD-binding, type 2, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0008762 UDP-N-acetylmuramate dehydrogenase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:3.30.43.10 no description 0.00017 75-137
IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Gene3D G3DSA:3.30.465.10 no description 2e-12 138-249
no_ID  
HMMPanther PTHR32448 FAMILY 1.2e-264 1-532
Seg seg seg NA 2-24
177-188
229-233
246-258
Wolf-PSORT
Lj6g3v1629450.1	chlo 5, cyto 2, vacu 2, E.R. 2, E.R._vacu 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1629450.1