Miyakogusa Predicted Gene

Lj6g3v1628420.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IMM5_MEDTR 567 77.2 88.8 (tr|G7IMM5) Reticuline oxidase-like protein OS=Medicago truncatula GN=MTR_2g031490 PE=4 SV=1
TAIR_pep AT4G20840.1 442 63.1 76.7 | Symbols: | FAD-binding Berberine family protein | chr4:11157916-11159535 FORWARD LENGTH=539
Medicago Medtr2g031490.1 566 77.2 88.8 | FAD-binding berberine family protein | HC | chr2:11820598-11822452 | 20130731
Soybean Glyma15g14040.1 559 78.5 88.4  
LJGI gnl|LJGI|TC74464 1203 100.0 100.0 similar to UniRef100_A7Q4S9 Cluster: Chromosome chr10 scaffold_50, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_50, whole genome shotgun sequence - Vitis vinifera (Grape), partial (25%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1628420.1 length: 347 aa.
IPR012951 Berberine/berberine-like
method AccNumber shortName E-value location
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08031 BBE 3.7e-22 283-340
IPR016166 FAD-binding, type 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
ProfileScan PS51387 FAD_PCMH 9.022 1-59
superfamily SSF56176 FAD-binding 3.6e-16 4-60
no_ID  
HMMPanther PTHR32448 FAMILY 6.1e-195 1-347
Seg seg seg NA 40-44
Wolf-PSORT
Lj6g3v1628420.1	cyto 5, nucl 2.5, cyto_pero 2.5, cyto_E.R. 2.5, chlo 2, mito 2, chlo_mito 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1628420.1