Miyakogusa Predicted Gene

Lj6g3v1618410.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KBJ9_MEDTR 785 88.2 93.8 (tr|G7KBJ9) AP-4 complex subunit mu OS=Medicago truncatula GN=MTR_5g066050 PE=4 SV=1
TAIR_pep AT4G24550.2 716 79.6 87.5 | Symbols: | Clathrin adaptor complexes medium subunit family protein | chr4:12675873-12678903 FORWARD LENGTH=451
Medicago Medtr5g066050.1 785 88.2 93.8 | clathrin-adaptor medium chain AP-2 | HC | chr5:27832038-27823989 | 20130731
Soybean Glyma14g35990.1 783 88.0 93.3  
LJGI gnl|LJGI|TC60667 2561 99.9 99.9 similar to UniRef100_A7NT73 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1618410.2 length: 481 aa.
IPR001392 Clathrin adaptor, mu subunit
method AccNumber shortName E-value location
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
FPrintScan PR00314 CLATHRINADPT 6e-33 12-32
101-128
256-283
325-340
HMMPIR PIRSF005992 Adaptor 8.6e-160 1-446
IPR008968 Clathrin adaptor, mu subunit, C-terminal
Molecular Function GO:0005515 protein binding    
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
HMMPfam PF00928 Adap_comp_sub 5.1e-65 182-430
ProfileScan PS51072 MHD 61.472 180-451
superfamily SSF49447 Second 3.1e-61 172-454
IPR011012 Longin-like domain
Biological Process GO:0006810 transport    
superfamily SSF64356 SNARE-like 8.7e-38 1-143
no_ID  
Gene3D G3DSA:2.60.40.1170 no description 5e-47 182-341
Gene3D G3DSA:3.30.450.60 no description 1.3e-43 1-140
HMMPanther PTHR11998 CLATHRIN 1e-195 1-433
HMMPanther PTHR11998:SF13 CLATHRIN 1e-195 1-433
Seg seg seg NA 236-252
441-456
Wolf-PSORT
Lj6g3v1618410.2	chlo 6, cyto 3, chlo_mito 3, nucl 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1618410.2