Miyakogusa Predicted Gene

Lj6g3v1618310.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MG80_SOYBN 891 82.5 90.9 (tr|I1MG80) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G30700.1 658 62.0 78.5 | Symbols: | FAD-binding Berberine family protein | chr1:10892623-10894437 FORWARD LENGTH=527
Medicago Medtr2g031590.1 858 77.9 88.5 | FAD-binding berberine family protein | HC | chr2:11933055-11934989 | 20130731
Soybean Glyma15g14210.1 891 82.5 90.9  
LJGI gnl|LJGI|TC57865 1503 100.0 100.0 similar to UniRef100_A7Q4U0 Cluster: Chromosome chr10 scaffold_50, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_50, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1618310.1 length: 537 aa.
IPR006094 FAD linked oxidase, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0008762 UDP-N-acetylmuramate dehydrogenase activity    
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF01565 FAD_binding_4 1.4e-25 83-219
IPR012951 Berberine/berberine-like
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08031 BBE 3.6e-20 473-530
IPR016166 FAD-binding, type 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
ProfileScan PS51387 FAD_PCMH 16.620 78-252
superfamily SSF56176 FAD-binding 5.7e-48 17-253
IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Gene3D G3DSA:3.30.465.10 no description 2.6e-11 138-253
no_ID  
HMMPanther PTHR32448 FAMILY 1.3e-297 5-537
Seg seg seg NA 11-28
181-192
Wolf-PSORT
Lj6g3v1618310.1	chlo 4, vacu 4, E.R. 2, mito 1.5, mito_plas 1.5, cyto_E.R. 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1618310.1