Miyakogusa Predicted Gene

Lj6g3v1602960.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr6

Full length sequence(26885540 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7K3X5_SOYBN 1318 87.3 91.8 (tr|K7K3X5) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT4G19040.1 1157 77.9 86.0 | Symbols: EDR2 | ENHANCED DISEASE RESISTANCE 2 | chr4:10431799-10437171 REVERSE LENGTH=718

Medicago Medtr5g027200.1 1286 85.8 90.6 | pleckstrin-like (PH) and lipid-binding START domain protein | HC | chr5:11278250-11291501 | 20130731

Soybean Glyma10g35460.1 353 31.3 48.9

LJGI gnl|LJGI|TC69229 1998 100.0 100.0 similar to UniRef100_A7QHC7 Cluster: Chromosome chr2 scaffold_97, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_97, whole genome shotgun sequence - Vitis vinifera (Grape), partial (46%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj6g3v1602960.1 length: 719 aa.

IPR001849 Pleckstrin homology domain

method AccNumber shortName E-value location

Molecular Function GO:0005515 protein binding

Molecular Function GO:0005543 phospholipid binding

HMMSmart SM00233 Pleckstrin 2.8e-08 5-113

ProfileScan PS50003 PH_DOMAIN 9.079 4-111

IPR002913 START domain

HMMPfam PF01852 START 2.9e-17 227-363

HMMSmart SM00234 in 1.4e-42 181-391

ProfileScan PS50848 START 23.354 201-381

IPR009769 Domain of unknown function DUF1336

HMMPfam PF07059 DUF1336 5.6e-74 504-708

IPR011993 Pleckstrin homology-like domain

Gene3D G3DSA:2.30.29.30 no description 5.1e-08 3-117

IPR023393 START-like domain

Gene3D G3DSA:3.30.530.20 no description 3e-50 177-391

no_ID

HMMPanther PTHR12136 STEROIDOGENIC 6.3e-173 4-404

HMMPanther PTHR12136:SF13 SUBFAMILY 6.3e-173 4-404

Seg seg seg NA 493-502
662-680

superfamily SSF50729 PH 3.1e-12 1-125

superfamily SSF55961 Bet 6.3e-32 197-394

Wolf-PSORT

Lj6g3v1602960.1 chlo 5, nucl 3, mito 2, plas 2, cyto_nucl 2, mito_plas 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj6g3v1602960.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7K3X5_SOYBN	1318	87.3	91.8	(tr\|K7K3X5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT4G19040.1	1157	77.9	86.0	\| Symbols: EDR2 \| ENHANCED DISEASE RESISTANCE 2 \| chr4:10431799-10437171 REVERSE LENGTH=718
Medicago	Medtr5g027200.1	1286	85.8	90.6	\| pleckstrin-like (PH) and lipid-binding START domain protein \| HC \| chr5:11278250-11291501 \| 20130731
Soybean	Glyma10g35460.1	353	31.3	48.9
LJGI	gnl\|LJGI\|TC69229	1998	100.0	100.0	similar to UniRef100_A7QHC7 Cluster: Chromosome chr2 scaffold_97, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr2 scaffold_97, whole genome shotgun sequence - Vitis vinifera (Grape), partial (46%)

IPR001849	Pleckstrin homology domain
Lj6g3v1602960.1				length: 719 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0005515	protein binding
Molecular Function	GO:0005543	phospholipid binding
HMMSmart	SM00233	Pleckstrin	2.8e-08	5-113
ProfileScan	PS50003	PH_DOMAIN	9.079	4-111
IPR002913	START domain
HMMPfam	PF01852	START	2.9e-17	227-363
HMMSmart	SM00234	in	1.4e-42	181-391
ProfileScan	PS50848	START	23.354	201-381
IPR009769	Domain of unknown function DUF1336
HMMPfam	PF07059	DUF1336	5.6e-74	504-708
IPR011993	Pleckstrin homology-like domain
Gene3D	G3DSA:2.30.29.30	no description	5.1e-08	3-117
IPR023393	START-like domain
Gene3D	G3DSA:3.30.530.20	no description	3e-50	177-391
no_ID
HMMPanther	PTHR12136	STEROIDOGENIC	6.3e-173	4-404
HMMPanther	PTHR12136:SF13	SUBFAMILY	6.3e-173	4-404
Seg	seg	seg	NA	493-502 662-680
superfamily	SSF50729	PH	3.1e-12	1-125
superfamily	SSF55961	Bet	6.3e-32	197-394