Miyakogusa Predicted Gene

Lj6g3v1584620.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7L4J2_MEDTR 154 92.1 96.1 (tr|G7L4J2) Nuclear transcription factor Y subunit B-3 (Fragment) OS=Medicago truncatula GN=MTR_7g061270 PE=4 SV=1
TAIR_pep AT3G53340.1 150 90.8 96.1 | Symbols: NF-YB10 | nuclear factor Y, subunit B10 | chr3:19774667-19775991 REVERSE LENGTH=176
Medicago Medtr7g100650.1 153 92.1 96.1 | nuclear transcription factor Y subunit B | HC | chr7:40538877-40546559 | 20130731
Soybean Glyma10g05610.1 154 94.7 96.1  
LJGI gnl|LJGI|TC60173 498 97.8 97.8 similar to UniRef100_Q1W9Y2 Cluster: Transcription factory NF-YB; n=1; Salvia miltiorrhiza|Rep: Transcription factory NF-YB - Salvia miltiorrhiza (Chinese sage), partial (56%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1584620.1 length: 120 aa.
IPR003956 Transcription factor, NFYB/HAP3, conserved site
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
PatternScan PS00685 NFYB_HAP3 NA 22-38
IPR003957 Transcription factor, CBFA/NFYB, DNA topoisomerase
Molecular Function GO:0003677 DNA binding    
FPrintScan PR00615 CCAATSUBUNTA 3.1e-20 19-37
38-56
57-75
HMMPanther PTHR11064:SF9 CCAAT-BINDING 7.6e-56 1-76
IPR003958 Transcription factor CBF/NF-Y/archaeal histone
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00808 CBFD_NFYB_HMF 3.8e-21 1-55
IPR009072 Histone-fold
Molecular Function GO:0046982 protein heterodimerization activity    
Gene3D G3DSA:1.10.20.10 no description 1.1e-39 1-85
superfamily SSF47113 Histone-fold 2.9e-25 1-89
no_ID  
HMMPanther PTHR11064 CCAAT-BINDING 7.6e-56 1-76
Seg seg seg NA 77-93
Wolf-PSORT
Lj6g3v1584620.1	nucl 10, chlo 1, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1584620.1