Miyakogusa Predicted Gene

Lj6g3v1572430.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MGB0_SOYBN 683 82.5 91.8 (tr|I1MGB0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G30510.1 622 74.6 88.4 | Symbols: RPS1, ARRPS1 | ribosomal protein S1 | chr5:11619262-11621223 REVERSE LENGTH=416
Medicago Medtr2g033020.1 670 80.9 91.3 | 30S ribosomal protein S1 | HC | chr2:12449707-12453501 | 20130731
Soybean Glyma15g14550.1 683 82.5 91.8  
LJGI gnl|LJGI|TC75114 2169 99.6 99.6 similar to UniRef100_A7Q8U9 Cluster: Chromosome chr5 scaffold_64, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_64, whole genome shotgun sequence - Vitis vinifera (Grape), partial (81%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1572430.1 length: 404 aa.
IPR003029 Ribosomal protein S1, RNA-binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
HMMPfam PF00575 S1 8.2e-22 88-160
175-242
253-323
ProfileScan PS50126 S1 21.911 90-160
178-242
255-323
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 1e-22 86-160
168-243
251-325
superfamily SSF50249 Nucleic 1.7e-12 252-336
69-186
164-243
IPR022967 RNA-binding domain, S1
HMMSmart SM00316 Ribosomal 1.1e-24 88-160
176-242
253-323
no_ID  
Coil coil coiled-coil NA 340-361
HMMPanther PTHR10724 S1 5e-97 38-403
Wolf-PSORT
Lj6g3v1572430.1	chlo 10, mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1572430.1