Miyakogusa Predicted Gene
- Lj6g3v1537040.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MI04_SOYBN |
518 |
83.2 |
89.8 |
(tr|K7MI04) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G47330.1 |
276 |
45.8 |
62.8 |
| Symbols: | CBS domain-containing protein with a domain of unknown function (DUF21) | chr1:17351149-17353739 FORWARD LENGTH=527 |
| Medicago |
Medtr6g052300.1 |
486 |
79.1 |
86.8 |
| CBS domain protein | HC | chr6:18250241-18256861 | 20130731 |
| Soybean |
Glyma09g24130.1 |
398 |
74.1 |
79.7 |
|
| LJGI |
gnl|LJGI|TC77020 |
61.9 |
85.9 |
85.9 |
similar to UniRef100_A7NTC6 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1537040.1 |
length: 302 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.10.580.10 |
no description |
0.00031 |
64-182 |
| HMMPanther |
PTHR12064 |
ANCIENT |
6.5e-127 |
1-296 |
| HMMPanther |
PTHR12064:SF2 |
UNCHARACTERIZED |
6.5e-127 |
1-296 |
| Seg |
seg |
seg |
NA |
8-13 |
| superfamily |
SSF54631 |
CBS-domain |
0.00089 |
71-131 |
- Wolf-PSORT
Lj6g3v1537040.1 vacu 6, extr 2, E.R. 2, chlo 1, nucl 1, plas 1, golg 1, nucl_plas 1, golg_plas 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1537040.1 |
|