Miyakogusa Predicted Gene
- Lj6g3v1513590.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C6T852_SOYBN |
403 |
82.1 |
88.9 |
(tr|C6T852) Uncharacterized protein OS=Glycine max PE=2 SV=1 |
| TAIR_pep |
AT1G34770.1 |
281 |
59.1 |
78.0 |
| Symbols: | CONTAINS InterPro DOMAIN/s: MAGE protein (InterPro:IPR002190); Has 1274 Blast hits to 1260 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1104; Fungi - 45; Plants - 49; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). | chr1:12746624-12748449 FORWARD LENGTH=237 |
| Medicago |
Medtr2g035310.1 |
366 |
77.3 |
86.2 |
| melanoma-associated antigen G1-like protein | HC | chr2:13558621-13556435 | 20130731 |
| Soybean |
Glyma15g15640.1 |
403 |
82.1 |
88.9 |
|
| LJGI |
gnl|LJGI|TC79546 |
109 |
100.0 |
100.0 |
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1513590.1 |
length: 234 aa. |
| IPR002190 |
MAGE protein |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR11736 |
MELANOMA-ASSOCIATED |
1e-83 |
1-229 |
| HMMPfam |
PF01454 |
MAGE |
1.5e-39 |
25-209 |
| ProfileScan |
PS50838 |
MAGE |
15.500 |
18-224 |
| no_ID |
|
| HMMPanther |
PTHR11736:SF6 |
MAGE-RELATED |
1e-83 |
1-229 |
| Seg |
seg |
seg |
NA |
85-99 |
- Wolf-PSORT
Lj6g3v1513590.1 chlo 2, nucl 2, cyto 2, plas 2, vacu 2, E.R. 2, cyto_nucl 2, nucl_plas 2, E.R._vacu 2, E.R._plas 2, cyto_E.R. 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1513590.1 |
|