Miyakogusa Predicted Gene
- Lj6g3v1480340.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1N0A2_SOYBN |
310 |
51.2 |
66.0 |
(tr|I1N0A2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G06600.3 |
92.4 |
37.9 |
60.6 |
| Symbols: UBP12 | ubiquitin-specific protease 12 | chr5:2020682-2027834 REVERSE LENGTH=985 |
| Medicago |
Medtr7g107200.1 |
234 |
37.2 |
53.7 |
| MATH (meprin and TRAF-C-like) domain protein | LC | chr7:43710995-43709256 | 20130731 |
| Soybean |
Glyma18g08540.1 |
310 |
51.2 |
66.0 |
|
| LJGI |
gnl|LJGI|FS360167 |
131 |
79.7 |
79.7 |
similar to UniRef100_Q6BKC6 Cluster: Similarities with CA4497|IPF4064 Candida albicans IPF4064; n=1; Debaryomyces hansenii|Rep: Similarities with CA4497|IPF4064 Candida albicans IPF4064 - Debaryomyces hansenii (Yeast) (Torulaspora hansenii), partial (3%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1480340.1 |
length: 298 aa. |
| IPR002083 |
MATH |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00917 |
MATH |
2.1e-05 |
9-85 |
| HMMSmart |
SM00061 |
meprin |
1e-05 |
4-109 |
| ProfileScan |
PS50144 |
MATH |
19.573 |
2-110 |
| IPR008974 |
TRAF-like |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| superfamily |
SSF49599 |
TRAF |
1.7e-20 |
4-122 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
238-266 |
| Gene3D |
G3DSA:2.60.210.10 |
no description |
2.7e-09 |
4-90 |
| HMMPanther |
PTHR24006 |
FAMILY |
6.6e-15 |
9-112 |
- Wolf-PSORT
Lj6g3v1480340.1 cyto 10, nucl 2, mito 1, vacu 1, cysk_nucl 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1480340.1 |
|