database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | K7MBF2_SOYBN | 1177 | 83.4 | 90.8 | (tr|K7MBF2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
TAIR_pep | AT3G06880.2 | 760 | 55.1 | 72.7 | | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:2170516-2175686 REVERSE LENGTH=1264 |
Medicago | Medtr2g436530.1 | 1131 | 81.3 | 89.0 | | E3 ubiquitin-protein ligase LIN-like protein, putative | HC | chr2:14213566-14206242 | 20130731 |
Soybean | Glyma15g15950.1 | 1014 | 74.4 | 82.5 | |
LJGI | gnl|LJGI|TC74375 | 1808 | 99.7 | 99.7 | weakly similar to UniRef100_A7Q8C8 Cluster: Chromosome chr5 scaffold_64, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_64, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%) |
Lj6g3v1464020.1 | length: 663 aa. | |||
IPR001680 | WD40 repeat | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0005515 | protein binding | ||
HMMPfam | PF00400 | WD40 | 4.6e-07 | 379-409 419-453 |
HMMSmart | SM00320 | WD40 | 62 | 369-409 414-453 495-531 583-622 |
ProfileScan | PS50082 | WD_REPEATS_2 | 12.514 | 377-418 421-454 |
IPR015943 | WD40/YVTN repeat-like-containing domain | |||
Molecular Function | GO:0005515 | protein binding | ||
Gene3D | G3DSA:2.130.10.10 | no description | 8.5e-25 | 374-660 |
IPR016024 | Armadillo-type fold | |||
Molecular Function | GO:0005488 | binding | ||
superfamily | SSF48371 | ARM | 2.8e-10 | 28-369 |
IPR017986 | WD40-repeat-containing domain | |||
Molecular Function | GO:0005515 | protein binding | ||
ProfileScan | PS50294 | WD_REPEATS_REGION | 17.086 | 377-462 |
superfamily | SSF50978 | WD40 | 4.5e-26 | 373-621 |
IPR019775 | WD40 repeat, conserved site | |||
PatternScan | PS00678 | WD_REPEATS_1 | NA | 396-410 |
no_ID | ||||
HMMPanther | PTHR22844 | F-BOX | 1.1e-21 | 385-660 |
Seg | seg | seg | NA | 279-298 |
Lj6g3v1464020.1 nucl 8, cyto 3, vacu 2
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj6g3v1464020.1 |